PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10432060g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 340aa    MW: 39162.5 Da    PI: 8.1111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10432060g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09157201554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h ++Er+RR ++++ f+ L +llP +      K +K ++L+ + +Y+++L
  MA_10432060g0010 157 HMIAERNRRGKLKHHFSLLHSLLPYN-----SKRDKYSVLTNTFKYMSEL 201
                       7899********************98.....7***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-13152221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.303152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.79E-7156202No hitNo description
Gene3DG3DSA:4.10.280.102.5E-10156219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-6157201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-6158207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MASSGSGLIQ PNGKNSTTGN INADSMSTMD EAHFELLPLY STAKTSWYCS YSEDMETFYP  60
FDRCNISNGH SHPQSLIVAN NIISAPQSSM LYRQSAFDSY LRPNTHSVYV KNGRENLMKR  120
CFKFLRKIEA QKLNQAANIQ EQHEFDVSLQ NKAAFHHMIA ERNRRGKLKH HFSLLHSLLP  180
YNSKRDKYSV LTNTFKYMSE LKLRVDDLEQ INRALEESLR INISKKEGST SFDLRLEENQ  240
ATLLYSSDEV VLEQSKEIPN HVDMRINVRI DPLSSPTSLM IVLLERLREL QLELVSVQSN  300
VQPFKLEVRL LITVIKGDLL ESSRWENVVQ VVRRTFSVNE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1193130.0BT119313.1 Picea glauca clone GQ04104_B13 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1163137